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Fixed installation issue and added mm39 #123

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Fixed installation issue and added mm39 #123

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d99cbbe
Added mm39 and fixed issue #121
Dec 22, 2025
14900e8
Fixed an issue
cviets Jan 2, 2026
02bdac9
Specified building .so files in README
cviets Jan 2, 2026
b625212
Delete clipper/src/readsToWiggle.c
cviets Jan 2, 2026
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1 change: 1 addition & 0 deletions README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,7 @@ cd clipper
conda env create -f environment3.yml
conda activate clipper3
pip install .
python3 setup.py build_ext --inplace
```
### Alternative installation
1. Thanks @rekado for making clipper available at GNU Guix `guix install clipper`
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78,334 changes: 78,334 additions & 0 deletions clipper/data/mm39.AS.STRUCTURE.COMPILED.gff
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