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Web tool based on Python and Streamlit to quickly optimize protein expression using Scikit-learn.

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Enzyme Expression Optimization

Web tool based on Python and Streamlit to quickly optimize protein expression using Scikit-learn.

Streamlit App

Requirements:

  • Streamlit
  • Seaborn
  • Scikit-learn

Start it with: $ streamlit run eeo.py

Test it with the example.csv file!

Installation with Conda

  1. Download miniconda from https://docs.conda.io/en/latest/miniconda.html
  2. Open an Anaconda Prompt and go to the EEO folder (cd <PATH>)
  3. Type conda env create -f eeo.yml (This takes a while)
  4. Actiavte the enviroment with conda activate eeo
  5. In the EEO folder type streamlit run eeo.py

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Web tool based on Python and Streamlit to quickly optimize protein expression using Scikit-learn.

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