Bump tifffile from 2025.6.11 to 2026.1.28

[dependabot]

Bumps tifffile from 2025.6.11 to 2026.1.28.

Release notes

Sourced from tifffile's releases.

v2026.1.28

Read and write TIFF files

Tifffile is a Python library to

1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, GeoTIFF, Adobe DNG, ZIF (Zoomable Image File Format), MetaMorph STK, Zeiss LSM, ImageJ hyperstack, Micro-Manager MMStack and NDTiff, SGI, NIHImage, Olympus FluoView and SIS, ScanImage, Molecular Dynamics GEL, Aperio SVS, Leica SCN, Roche BIF, PerkinElmer QPTIFF (QPI, PKI), Hamamatsu NDPI, Argos AVS, Philips DP, and ThermoFisher EER formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changes

• Deprecate colormaped parameter in imagej_description (use colormapped).
• Fix code review issues.

v2026.1.14

Read and write TIFF files

Tifffile is a Python library to

1. store NumPy arrays in TIFF (Tagged Image File Format) files, and
2. read image and metadata from TIFF-like files used in bioimaging.

Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, GeoTIFF, Adobe DNG, ZIF (Zoomable Image File Format), MetaMorph STK, Zeiss LSM, ImageJ hyperstack, Micro-Manager MMStack and NDTiff, SGI, NIHImage, Olympus FluoView and SIS, ScanImage, Molecular Dynamics GEL, Aperio SVS, Leica SCN, Roche BIF, PerkinElmer QPTIFF (QPI, PKI), Hamamatsu NDPI, Argos AVS, Philips DP, and ThermoFisher EER formatted files.

Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels.

Image data can be written to TIFF, BigTIFF, OME-TIFF, and ImageJ hyperstack compatible files in multi-page, volumetric, pyramidal, memory-mappable, tiled, predicted, or compressed form.

Many compression and predictor schemes are supported via the imagecodecs library, including LZW, PackBits, Deflate, PIXTIFF, LZMA, LERC, Zstd, JPEG (8 and 12-bit, lossless), JPEG 2000, JPEG XR, JPEG XL, WebP, PNG, EER, Jetraw, 24-bit floating-point, and horizontal differencing.

Tifffile can also be used to inspect TIFF structures, read image data from multi-dimensional file sequences, write fsspec ReferenceFileSystem for TIFF files and image file sequences, patch TIFF tag values, and parse many proprietary metadata formats.

Changes

• Improve code quality.

v2025.12.20

Read and write TIFF files

Tifffile is a Python library to

... (truncated)

Changelog

Sourced from tifffile's changelog.

2026.1.28

• Pass 5128 tests.
• Deprecate colormaped parameter in imagej_description (use colormapped).
• Fix code review issues.

2026.1.14

• Improve code quality.

2025.12.20

• Do not initialize output arrays.

2025.12.12

• Improve code quality.

2025.10.16

• Add option to decode EER super-resolution sub-pixels (breaking, #313).
• Parse EER metadata to dict (breaking).

2025.10.4

• Fix parsing SVS description ending with "|".

2025.9.30

• Fix reading NDTiff series with unordered axes in index (#311).

2025.9.20

• Derive TiffFileError from ValueError.
• Natural-sort files in glob pattern passed to imread by default (breaking).
• Fix optional sorting of list of files passed to FileSequence and imread.

2025.9.9

• Consolidate Nuvu camera metadata.

2025.8.28

• Support DNG DCP files (#306).

Commits

• 65c612b Release v2026.1.28
• b250f19 Update CHANGES.rst
• b53e1a3 Update tifffile/tifffile.py
• 76cbdc9 Update tests/test_tifffile.py
• 6907b9e Update tifffile/zarr.py
• beaec81 Update examples/earthbigdata.py
• ee59bdb Update tifffile/numcodecs.py
• 516608e Update tifffile/_imagecodecs.py
• d458b2f Update docs/make.py
• 8e4630b Release v2026.1.14
• Additional commits viewable in compare view

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