Optimize neighbor list and k-point eigensolver - #6
Merged
Merged
Conversation
Replace O(N_cells·N²) dense distance allocation with matscipy cell-list neighbor detection (O(N·z̄)), then rebuild only the relevant cells differentiably from positions so autograd is preserved for forces/stress. Batch all k-points into a single eighb call instead of a Python for-loop, removing serial overhead and letting cuBLAS/LAPACK parallelize across k-points.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
N = number of atoms being considered
z = average number of neighbors for each atom being considered
K = number of k-points
Replace O(N_cells·N²) dense distance allocation with matscipy cell-list neighbor detection (O(N·z)), then rebuild only the relevant cells differentiably from positions so autograd is preserved for forces/stress.
Batch all k-points into a single eighb call instead of a Python for-loop, removing serial overhead and letting cuBLAS/LAPACK parallelize across k-points. Still O(K*N^3), but now it can run in parallel on GPU
Used Claude for this, may be a work in progress