Skip to content

Update README.md and use minimal R CMD GitHub actions #146

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
milanwiedemann wants to merge 2 commits into
base: main
Choose a base branch
from
Open

Update README.md and use minimal R CMD GitHub actions #146

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
b9848f2
Update `README.md`
milanwiedemann Mar 11, 2026
e3dc709
Simplify R CMD checks on GitHub
milanwiedemann Mar 11, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
21 changes: 1 addition & 20 deletions .github/workflows/R-CMD-check.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,41 +4,22 @@ on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: R-CMD-check.yaml

permissions: read-all

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
Expand Down
6 changes: 3 additions & 3 deletions README.Rmd
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -17,8 +17,7 @@ knitr::opts_chunk$set(

<!-- badges: start -->

[![R-CMD-check](https://github.com/ebmdatalab/codeusage/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/ebmdatalab/codeusage/actions/workflows/R-CMD-check.yaml)

[![R-CMD-check](https://github.com/bennettoxford/opencodecounts/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bennettoxford/opencodecounts/actions/workflows/R-CMD-check.yaml)
<!-- badges: end -->

The `opencodecounts` R package provides easy access to yearly summaries of clinical code usage in England. The package makes NHS England's published datasets available in R and an interactive online tool, covering SNOMED CT codes in primary care and ICD-10/OPCS-4 codes in secondary care.
Expand All @@ -30,7 +29,8 @@ You can launch the interactive Shiny app by clicking on [*Launch Shiny app*](htt
You can install the `opencodecounts` package in R with:

```r
remotes::install_github("bennettoxford/opencodecounts")
# install.packages("pak")
pak::pak("bennettoxford/opencodecounts")
```

## How-to guides
Expand Down
6 changes: 3 additions & 3 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -5,8 +5,7 @@

<!-- badges: start -->

[![R-CMD-check](https://github.com/ebmdatalab/codeusage/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/ebmdatalab/codeusage/actions/workflows/R-CMD-check.yaml)

[![R-CMD-check](https://github.com/bennettoxford/opencodecounts/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/bennettoxford/opencodecounts/actions/workflows/R-CMD-check.yaml)
<!-- badges: end -->

The `opencodecounts` R package provides easy access to yearly summaries
Expand All @@ -27,7 +26,8 @@ section.
You can install the `opencodecounts` package in R with:

``` r
remotes::install_github("bennettoxford/opencodecounts")
# install.packages("pak")
pak::pak("bennettoxford/opencodecounts")
```

## How-to guides
Expand Down
Loading