2.4.1

Changed

• Update to BIDS Schema v1.2.1 (BIDS v1.11.1)
• The web validator now renders Markdown in issue messages.

Fixed

• Validating directory names is now skipped for unknown DatasetTypes in dataset_description.json. Previously this would crash, preventing the error in DatasetType values from being reported to the user.

Infrastructure

• Added a pre-commit configuration for developers. To enable, run pre-commit install. For speed, we recommend installing pre-commit via uv tool install pre-commit --with=pre-commit-uv.

Pull requests merged

• feat: render markdown in web validator (fixes #211) by @BitForge95 in #350
• fix: Skip directory match for unknown DatasetType by @effigies in #354
• chore: Add pre-commit hooks by @effigies in #341
• chore: Bump BIDS schema to 1.2.1 by @effigies in #360

Full Changelog: 2.4.0...2.4.1

2.4.0

Changed

• Update to BIDS Schema v1.2.0 (BIDS v1.11.0)

Full Changelog: 2.3.2...2.4.0

2.3.2

Changed

• File reads are temporarily cached to avoid multiple fetches/opens.

Fixed

• Retrieval of remote data on S3 is now more robust, avoiding resource leaks
  by setting timeouts and a reasonable retry protocol.

Pull requests merged

• feat: Memoize readBytes/readText to avoid excess fetches by @effigies in #349
• fix: Add timeout to avoid resource leak, retry failed fetches by @effigies in #351

Full Changelog: 2.3.1...2.3.2

2.3.0

Changed

• Render Markdown links as OSC-8 links in terminals where support is detected.

Fixed

• Exit with a non-zero exit code if nested datasets are validated and found to have errors.

• Prevent HED check from failing for null values found in sidecar metadata.

Pull requests merged

• fix: Perserve types for memoized functions by @nellh in #337
• chore(deps): Update strategy compatible by @github-actions[bot] in #343
• Fix/339 bug update exit code if recursed directory contains errors by @bendhouseart in #340
• make select not fail on sidecar without HED key pair by @bendhouseart in #346

New Contributors

• @bendhouseart made their first contribution in #340

Full Changelog: 2.2.10...2.3.0

2.2.10

Changed

• Improve types for memoized functions by passing argument and return types to callers.

Fixed

• Extract AWS region from S3 special remote, defaulting to us-east-1.

Full Changelog: 2.2.9...2.2.10

2.2.9

Changed

• Reverted terminal URLs for the 2.2.x series. It should be back in 2.3.0.

Full Changelog: 2.2.8...2.2.9

2.2.8

Changed

• Render Markdown links as OSC-8 links in terminals where support is detected.

Fixed

• Fix typo in S3 URL generation code that prevented reading remote files.

Full Changelog: 2.2.7...2.2.8

2.2.7

Added

• Maintainer documentation for creating and fixing releases.

• Support for rendering Markdown in validation messages in the terminal.

• Display validation summaries for derivative datasets when recursive validation (-r/--recursive) is run.

• Support for presigning S3 URLs if AWS credentials are detected.

Fixed

• Validate derivative file paths relative to the derivative dataset root.

• Have all three calls to fetch in HttpOpener use same error handling.

• Fix memoization memory leak for readRemotes.

• Replace SPEC_ROOT placeholder with actual documentation link in CLI output.

Infrastructure

• Pin Deno to 2.5.6 in wheel builds to account for bugs with MacOS binaries compiled with 2.6.0.

Full Changelog: 2.2.6...2.2.7

2.2.6

This release addresses issues with our publication process.

Pull requests merged

• chore: Publish whatever wheels successfully build by @effigies in #313

Full Changelog: 2.2.5...2.2.6

2.2.5

Added

• Support for template and cohort directories, as introduced in BEP038.

Fixed

• The AMBIGUOUS_AFFINE issue was given an error message and set to warning.
• Very oblique affines are no longer considered ambiguous.
• Resolved TypeError when rendering issues for JSON outputs.

Pull requests merged

• fix: Filter issue fields when storing by @effigies in #311
• fix: Define AMBIGUOUS_AFFINE, make a warning, raise less often by @effigies in #310
• BEP038 patches by @effigies in #288

Full Changelog: 2.2.4...2.2.5