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Fluorescent Cell Detection Tool

Detecting fluorescent-labeled cells in large, high-resolution brain histology images.

  1. mask/: Generating a mask of brain section within the entire image

  2. unsupervised/: unsupervised algorithm for cell detection

  3. visualization/: scripts for working with very large images

scratch_code/: work in progress.

About

This project is a part of BRAIN Initiative Cell Census Network (2017-2022), and Brain/MINDS Marmoset Neural Architecture (2015-2019).

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