I want to use CIRIquant to analysis data. And I try to install it, as the recommend way:
Download packed package
wget https://github.com/bioinfo-biols/CIRIquant/releases/download/v1.1.3/CIRIquant_v1.1.3.tar.gz
mkdir -p CIRIquant_env
tar zxvf CIRIquant_v1.1.3.tar.gz -C CIRIquant_env
Configuration environments (required)
conda activate ./CIRIquant_env
cd CIRIquant_env
make
I installed it sucessfully. But there are some notes above the command "The released package is a packed conda environment including all dependencie, make sure you have installed anaconda in your environment", which means that it is a conda env and includes all the dependencies.
At the line of "Prerequisites" , it says it need the version of samtools > 1.9. But from the conda env, the samtools version is 1.6. So, I am kind of confused. Are the two contradictory? So, what should I do ? just ignore it, or perform separate software upgrades in the same virtual environment, to meet the "Prerequisites" ?
I want to use CIRIquant to analysis data. And I try to install it, as the recommend way:
Download packed package
wget https://github.com/bioinfo-biols/CIRIquant/releases/download/v1.1.3/CIRIquant_v1.1.3.tar.gz
mkdir -p CIRIquant_env
tar zxvf CIRIquant_v1.1.3.tar.gz -C CIRIquant_env
Configuration environments (required)
conda activate ./CIRIquant_env
cd CIRIquant_env
make
I installed it sucessfully. But there are some notes above the command "The released package is a packed conda environment including all dependencie, make sure you have installed anaconda in your environment", which means that it is a conda env and includes all the dependencies.
At the line of "Prerequisites" , it says it need the version of samtools > 1.9. But from the conda env, the samtools version is 1.6. So, I am kind of confused. Are the two contradictory? So, what should I do ? just ignore it, or perform separate software upgrades in the same virtual environment, to meet the "Prerequisites" ?