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Incorporate minibatch-training #11

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2 changes: 1 addition & 1 deletion deepvelo/train.py
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Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,7 @@ def train(
callback: Callable = None,
**kwargs,
):
batch_size, n_genes = adata.layers["Ms"].shape
batch_size, n_genes = adata.layers["Ms"].shape # To be changed after mini-batch training is implemented
if configs["data_loader"]["args"]["velocity_genes"]:
n_genes = int(np.sum(adata.var["velocity_genes"]))
configs["arch"]["args"]["n_genes"] = n_genes
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