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Dev - #4958

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hanars merged 145 commits into
masterfrom
dev
Aug 25, 2025
Merged

Dev#4958
hanars merged 145 commits into
masterfrom
dev

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@hanars

@hanars hanars commented Aug 25, 2025

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  • All unit test are passing and coverage has not substantively dropped
  • No new dependency vulnerabilities have been introduced
  • Any changes to the docker image have been vetted for potential vulnerabilities
  • If any python requirements are updated, they are noted and here and will be updated before deploying:
  • Any database migrations are noted here, and will be run before deploying:
    • clickhouse migrations only
  • All major changes are recorded in the changelog, and the changelog has been updated to reflect the latest release
  • Any new endpoints are explicitly tested to ensure they are only accessible to correctly permissioned users
  • No secrets have been committed
  • Any changes to environment variables or secrets are noted here, and will properly configured before deploying:
  • The following charts will be updated as part of this release:
    • seqr
    • hail-search
    • vlm

hanars and others added 30 commits August 11, 2025 14:57
…ataset-type

fix gene search dataset type for clickhouse
explicitly include project guid in call filter
…ss-individual-guid

Add individual guids in post processing for multi project search
* gnomad genomes dict

* fix comma
hanars and others added 29 commits August 20, 2025 11:19
* add handling for clinvar edge case

* ws

* try values_list

* tearDown

* Update reload_clinvar_all_variants_tests.py

* suggestion
…ate-project

Backend specific deactivate project
Correctly handle multi sample types in variant lookup
@hanars
hanars merged commit 9a358dc into master Aug 25, 2025
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2 participants