CRISPR Streamline

Hosted here at the Cal Poly Bioinformatics Research Group

FAQ and more information here

This application is a web hosted pipeline between FlashFry and the UCSC Genome Browser API.

Backend Application Request Flow

** For devs **

1. /create_streamline_job
   • Payload contains identification file
   • Saves files under folder named job_id
   • Returns upload success and job_id
2. /check_job_status
   • Payload contains job_id
   • Returns job status
3. /results/<format>/<job_id>
   • Payload contains job_id
   • Returns streamline results in either xml or txt

Running

Run docker-compose up -d --build