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pip install deepcpg does not install tensorflow.

Status: Open.

#43 In cangermueller/deepcpg;

· shawarden opened on Feb 8, 2023

pip install deepcpg => bad interpreter: /anaconda3/envs/deepcpg/bin/python: no such file or directory

Status: Open.

#42 In cangermueller/deepcpg;

· shawarden opened on Nov 3, 2022

Negative strand index input

Status: Open.

#41 In cangermueller/deepcpg;

· yxwucq opened on Sep 19, 2022

Recommendations for using in Tumor Normal scenario

Status: Open.

#40 In cangermueller/deepcpg;

· harish0201 opened on Jun 28, 2022

Can't calculate the pair potential

Status: Open.

#39 In cangermueller/deepcpg;

· 1920993165 opened on May 31, 2021

keras/tensorflow version incompatibility

Status: Open.

#38 In cangermueller/deepcpg;

· sameelab opened on May 10, 2021

keras / tensorflow version compatibility

Status: Open.

#37 In cangermueller/deepcpg;

· rekham1077 opened on Jun 30, 2020

Fails CpG module training

Status: Open.

#36 In cangermueller/deepcpg;

· yoramzarai opened on Apr 22, 2020

CpG sites in the negative strand

Status: Open.

#33 In cangermueller/deepcpg;

· yasin-chop opened on Sep 30, 2019

Models in the zoo are not accessible

Status: Open.

#30 In cangermueller/deepcpg;

· yasin-chop opened on Sep 25, 2019

impute CpG values for gene by cell matrix

Status: Open.

#29 In cangermueller/deepcpg;

· shengyongniu opened on Sep 3, 2019

Unable to train joint model from pretrained cpg and dna model with tensorflow backend

Status: Open.

#28 In cangermueller/deepcpg;

· snajder-r opened on Aug 30, 2019