Update optimize cas-compute resource usage - #223
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| - Bumped ``cellarium-ml`` to ``0.0.10`` with updated ``torch`` and ``lightning`` dependencies (#218, #219) |
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is 0.0.10 still what you're using, or has it been bumped up?
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Hmmm. I haven't bumped it in backend yet..
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Well, the models are compatible between cellarium ml 10 and 11, it's mostly training features that were updated.
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was wondering if you needed the predict workaround for scVI but maybe you don't? probably not
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no... because you just directly call the model on a minibatch
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This current version I already tested, so it worked. I think maybe let's merge this one, and I will bump cellarium ml version to 0.0.11 in a separate PR?
sjfleming
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Love this PR! One tiny question about cellarium-ml version, but feel free to go ahead and merge!



Decreasing cloud run hardware decreases costs. It's helpful, before running massive benchmarking.
Closes #222