I tried to run the test_odp_basic.sh test after updating ODP, but I still encounter the same error (IndexError: list index out of range).
Cloned the ODP repo and updated with git pull
$ git pull
Already up to date.
So I should already have the recent fixes (including commit ba6c453).
Ran the test script:
$ sh tests/test_odp_basic/test_odp_basic.sh
However, I still got the following error:
We are in the test directory, /data/01/user157/software/odp/tests/test_odp_basic
Assuming unrestricted shared filesystem usage.
host: lz16
Building DAG of jobs...
InputFunctionException in rule hmm_1_against_prots in file "/data/01/user157/software/odp/tests/test_odp_basic/../../scripts/odp", line 2133:
Error:
IndexError: list index out of range
Wildcards:
coloredby=BCnS_LGs
sample=Hydra
Traceback:
File "/data/01/user157/software/odp/tests/test_odp_basic/../../scripts/odp", line 2161, in <lambda
Could you give me any suggestions?
Best wishes,
Na Wan
I tried to run the test_odp_basic.sh test after updating ODP, but I still encounter the same error (IndexError: list index out of range).
Cloned the ODP repo and updated with git pull
So I should already have the recent fixes (including commit ba6c453).
Ran the test script:
$ sh tests/test_odp_basic/test_odp_basic.shHowever, I still got the following error:
Could you give me any suggestions?
Best wishes,
Na Wan