Literature_Review_Tool

Literature Review Tool that utilises GSEP (Gather, Sort, Evaluate, Present). The code generates a comprehensive literature review for the given research question.

Research Question: "Clinical Trial Safety of Semaglutide"

Skip to clinical_trial_safety.md for the Literature Review of the above question generated by code.

Process is detailed below.

1. Extract Articles from PUBMED using BioPython API (Gather)

In this case, 1000 articles about Semaglutide were extracted.

2. Parse through returned data and isolate required parameters (Sort)

Parameters isolated: Title, Abstract and Author.

3. Generate embeddings for each abstract and the research question using Gemini Embeddings API (Evaluate)

The articles were then ranked using cosine similarity.

4. Call Gemini API to generate Literature review using top ranked articles

Gemini flash was used.