Dozmorov Lab
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excluderanges
excluderanges PublicGenomic coordinates of problematic genomic regions as GRanges
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HiCcompare
HiCcompare PublicJoint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the analysis of multiple Hi-C matrices
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multiHiCcompare
multiHiCcompare PublicJoint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.
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- multipletR Public
multipletR, Adaptive detection of human-mouse multiplets in patient-derived xenograft (PDX) single-cell RNA-seq data.
- EpiTADformer Public
EpiTADformer: A Transformer-Based Model for High-Resolution TAD Boundary Detection Using Epigenomic Signal Embeddings
- HiCcompare Public
Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the analysis of multiple Hi-C matrices
- multiHiCcompare Public
Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.
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