GitHub - edajeda/AP-for-RNASeq-data

Name		Name	Last commit message	Last commit date
README		README
comp_rpkm_cut_off_wf.1.0.pl		comp_rpkm_cut_off_wf.1.0.pl
concat_htseqCounts_wf.1.0.pl		concat_htseqCounts_wf.1.0.pl
corr_boxp_venn.1.0.R		corr_boxp_venn.1.0.R
rnaseq_wf_master.pl		rnaseq_wf_master.pl

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Scilifelab
Automatic pipeline for analysing RNASeq data. The pipeline uses FASTQC, Tophat, samtools, rpkmforgenes, htseqCount and the R package DESeq as well as custom scripts.

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