rnaseq_her2

Analysis of RNA-Seq/RSEM Data for HER2/ERRB2

31 Mar 2021

Most of the code is in the poorly named initial.R, the rest of the code is in the notebook .ipynb.

The document that brings everything together is tempus.html

Name		Name	Last commit message	Last commit date
Latest commit History 18 Commits
.gitattributes		.gitattributes
README.md		README.md
brca_tcga_clinical_data.csv		brca_tcga_clinical_data.csv
brca_tcga_erbb2_copy_number.csv		brca_tcga_erbb2_copy_number.csv
her2-logistic-regression.ipynb		her2-logistic-regression.ipynb
initial.R		initial.R
supreme_confusion.png		supreme_confusion.png
tempus.Rmd		tempus.Rmd
tempus.html		tempus.html
tologit.csv		tologit.csv

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