Template repo

This repository can be used to start building your own vocabulary in a way that is compatible with the github actions as defined in .github/workflows. For instructions on how to create a repo from a template.

.github

This folder contains the ISSUE TEMPLATES to add, modify or deprecate a vocabulary term as well as the config files to configure actions (.github/workflows).

Data

Add the vocabulary content as .csv and/or .yaml depending on the reusable workflows you want to use.

Rules

The voc2skosmos workflow that transforms a .csv into a SKOS vocabulary requires a set of yarrml rules.

Schema

Contains the data schema for the vocabulary terms and the changelog schema. Note that the workflows implemented within the eu-parc repository also support the usage of a uri to point to a data schema.

Changelog

The changelog should be used as an instrument to keep track of changes to the vocabulary in between releases. The changelog should be updated with each pull request. [NOTE: The changelog schema will be deprecated soon. We'll transform the workflows to simply use diffs of the released versions.]

Workflows

• Add identifiers:
• Publish Vocabulary: Two options (code for both hosted at voc2skosmos-workflow)
  • csv2skos: requires a .csv file in the data:
  • yml2skos: requires a .yml file made according to a LinkML schema:
• voc2nanopub: Not configured in the template but departs from the same LinkML-based .yml

Building vocabularies with LinkML

• LinkML documentation
• Example: matrix-vocabulary