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RT Agreement label is added, but not removed when compound demoted to unknown

bug

Status: Open.

#828 In eugenemel/maven;

· PMSeitzer opened on Feb 12, 2026

·  

2.12.7

Optional Sample Extension bugs

bug

gui_onlyGUI only feature requestGUI only feature request

Status: Open.

#827 In eugenemel/maven;

· PMSeitzer opened on Feb 12, 2026

·  

2.12.7

Save groupMz and groupRt values in peakgroup_scans table

enhancement

Status: Open.

#771 In eugenemel/maven;

· PMSeitzer opened on Apr 23, 2025

support option to search peakdetector with csv file (instead of just msp)

feature_branchImplement this work in a separate feature branch, merge to master via PRImplement this work in a separate feature branch, merge to master via PR

peakdetectorspecific to peakdetectorspecific to peakdetector

Status: Open.

#770 In eugenemel/maven;

· PMSeitzer opened on Apr 16, 2025

Peak Grouping Depends on Order of samples

bug

mysterious

Status: Open.

#749 In eugenemel/maven;

· PMSeitzer opened on Sep 12, 2024

·  

Peak Picking / Grouping Options v2

Fix peaks option to remove non-monoisotopic peak groups

bug

peakdetectorspecific to peakdetectorspecific to peakdetector

Status: Open.

#748 In eugenemel/maven;

· PMSeitzer opened on Sep 12, 2024

·  

Peak Picking / Grouping Options v2

Peak Group specific reextraction

enhancement

low_priority

Status: Open.

#744 In eugenemel/maven;

· PMSeitzer opened on Aug 16, 2024

·  

Peak Picking / Grouping Options v2

Differential weight assigned to uploaded spectral libraries

enhancement

externalRequest/issue from outside CalicoRequest/issue from outside Calico

Status: Open.

#726 In eugenemel/maven;

· Progress109 opened on May 22, 2024

MS2-based clustering

enhancement

Status: Open.

#712 In eugenemel/maven;

· PMSeitzer opened on Apr 8, 2024

Support encoding Scan m/zs as doubles (instead of floats)

enhancement

MALDESIMALDESI analysis and processingMALDESI analysis and processing

Status: Open.

#708 In eugenemel/maven;

· PMSeitzer opened on Mar 22, 2024

·  

Stalled

Option to transfer, combine properties from peaks properties during merging step

enhancement

Status: Open.

#687 In eugenemel/maven;

· PMSeitzer opened on Nov 20, 2023

·  

Peak Picking / Grouping Options v2

Support parsing and applying a different value for mergedSmoothingWindow

enhancement

peakdetectorspecific to peakdetectorspecific to peakdetector

stalledOn holdOn hold

Status: Open.

#666 In eugenemel/maven;

· PMSeitzer opened on Jul 31, 2023