nf-docs v0.2.1

Fixed

• Configure additional files for PyPI package distribution (#6)
• Fix ty typecheck errors with explicit dict type annotations (#7)

nf-docs v0.2.0

Added

• New table output format (-f table) with terraform-docs-style Markdown tables and marker
  injection for embedding generated docs into existing README files
• Template-based selective section rendering for the table format, allowing users to choose which
  sections to include
• Groovydoc @param and @return tag descriptions are now applied to process inputs and outputs
• Support for Nextflow typed syntax (val(x), path(x), tuple val(x), path(y), etc.) when
  parsing process inputs and outputs
• Enriched bare typed outputs from .nf source files with proper type and name extraction
• Pattern restriction display in HTML parameter cards
• nf-fgsv added as an example pipeline, with YAML and table example outputs for all pipelines

Fixed

• Parameters not displaying in HTML output due to README heading ID collisions with parameter IDs
• Parsing of bare typed outputs and ? nullable type from LSP hover content
• Use a valid GitHub markdown admonition type in README

Full Changelog: v0.1.0...v0.2.0

nf-docs v0.1.0

Initial release of nf-docs.

Added

• nf-docs generate command to extract and render pipeline documentation in HTML, JSON, YAML, and
  Markdown formats
• nf-docs inspect command for a dry-run summary of what nf-docs finds in a pipeline
• nf-docs download-lsp and nf-docs clear-cache utility commands
• Extraction of pipeline inputs from nextflow_schema.json and config parameters from
  nextflow.config
• Process, workflow, and function documentation via the Nextflow Language Server (LSP), including
  Groovydoc docstrings and typed I/O declarations
• nf-core meta.yml support for enriched module and subworkflow documentation
• Git-aware source code deep links for GitHub, GitLab, and Bitbucket
• XDG-compliant caching keyed by content hash and package version, with automatic invalidation
• User config file at ~/.config/nf-docs/config.yaml for persistent defaults

Full Changelog: https://github.com/ewels/nf-docs/commits/v0.1.0