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1. 2025_scDNA_paper 2025_scDNA_paper Public

   Collection of Scripts used in the SPC-PTA scDNA seq paper of Leishmania

   R

2. artlib artlib Public

   This is a simple bash script that takes as input a bam file and a reference genome, and outputs fastq and bam files with an aritificial library based on the input parameters.

   Shell

3. aneuQPCR aneuQPCR Public

   R package to work with qPCR quantification of (bulk) aneuploidies.

   R

4. GO_tools GO_tools Public

   A collection of simple R functions that are designed to assist GO enrichment analysis pipelines.

   R

5. flowchartMaker flowchartMaker Public

   A simple R script that uses the visNetwork package to create an interactive flow chart.

   HTML

6. scDNA_tools scDNA_tools Public

   Collection of scripts I use to analyse single-cell DNA seq data. Meant for personal use only.

   R