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Add openBIS file source #23458

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Add openBIS file source #23458

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3d18e37
Add openBIS file source
PlushZ Sep 4, 2026
c0a4818
Merge branch 'dev' into add-openbis-fs
PlushZ Sep 4, 2026
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3 changes: 3 additions & 0 deletions lib/galaxy/dependencies/__init__.py
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Expand Up @@ -321,6 +321,9 @@ def check_rspace_client(self):
def check_fs_irods(self):
return "irods" in self.file_sources

def check_pybis(self):
return "openbis" in self.file_sources

def check_watchdog(self):
install_set = {"auto", "True", "true", "polling", True}
return self.config["watch_tools"] in install_set or self.config["watch_tool_data_dir"] in install_set
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1 change: 1 addition & 0 deletions lib/galaxy/dependencies/conditional-requirements.txt
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Expand Up @@ -36,6 +36,7 @@ omero-py #type: omero
iiif-fsspec # type: iiif
fs-irods # type: irods, depends on python-irodsclient
mavedb-fsspec>=0.1.0 # type: mavedb
pybis==7.0.0rc1 # type: openbis, pinned pre-release required for openBIS 7 backend compatibility

# Vault backend
hvac
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