Skip to content

Version 1.3.0

Choose a tag to compare

View all tags
@asetGem asetGem released this 27 Apr 15:24
· 230 commits to master since this release
v1.3.0
d2da8d9

Changes:

all:
fixes issue #11 (cutN not taken into account when launched from configfile)

pangenome:

  • Fixes issue #14
  • changes in output directory structure (all mmseqs files in a separate directory, and simpler default pangenome filename)

corepers:
possibility to give a subset of genomes for the coregenome (instead of all genomes found in pan)

align:

  • Add possibility to ask for proteic alignments concatenated by genomes (in addition to nucleic ones)
  • fix logger detail issue
  • genome names can now contain a '.'

tree:

  • add TEST parameter when using IQtree
  • fix problem if user has iqtree2 version called by iqtree command.
Assets 2
Loading