metR is an R package with set of statistical tests for identification and visualisation
of Differentially Methylated Regions.
Along with a battery of statistical tests you will find here functions for ggplotting of identified regions and validation of power and sensitivity of different packages.
Data for these examples are downloaded from methylomedb
- metR: step by step https://geneticsmining.github.io/metR/articles/metR_step_by_step.html
- metR: a deeper study https://geneticsmining.github.io/metR/articles/metR_comparison.html
devtools::install_github("geneticsMiNIng/metR")