Skip to content
View gjhan100's full-sized avatar
💭
gh repo clone tomashhurst/Spectre
💭
gh repo clone tomashhurst/Spectre
2 followers · 40 following
  • Peking University
  • Beijing
  • 18:54 (UTC -12:00)

Block or report gjhan100

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
gjhan100/README.md

Welcome to GuojunHan Lab @ Peking University

This github serves the purpose to collect analysis and software repositories associated to our research.

Single-cell mass cytometry/spectrometry analysis

The following tools have been developed by the lab to perform multiplexed image analysis: gateAdata for deconvoluting mutiple manual gating results in anndata format

Popular repositories Loading

  1. DeepSpot DeepSpot Public

    Forked from ratschlab/DeepSpot

    DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images

    Jupyter Notebook

  2. imcyto imcyto Public

    Forked from nf-core/imcyto

    Image Mass Cytometry analysis pipeline

    Python

  3. IMC_Denoise IMC_Denoise Public

    Forked from PENGLU-WashU/IMC_Denoise

    IMC_Denoise: a software package to enhance Imaging Mass Cytometry - Nature Communications

    Jupyter Notebook

  4. readimc readimc Public

    Forked from BodenmillerGroup/readimc

    Python package for reading imaging mass cytometry (IMC) files

    Python

  5. imc imc Public

    Forked from ElementoLab/imc

    A package for the analysis of Imaging Mass Cytometry data

    Python

  6. ImaCytE ImaCytE Public

    Forked from biovault/ImaCytE

    ImaCytE is an interactive tool for data-driven exploration of Imaging Mass Cytometry data as presented in the paper "ImaCytE: Visual Exploration of Cellular Micro-environments for Imaging Mass Cyto…

    MATLAB