harrispopgen

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1. mushi mushi Public

   [mu]tation [s]pectrum [h]istory [i]nference

   Python 27 5

2. mutyper mutyper Public

   Ancestral k-mer mutation types for SNP data

   Python 9 4

3. cellspec cellspec Public

   A python package for analyzing variant calls from high throughput single cell genome sequencing experiments

   Python 1

4. gagp_mut_evol gagp_mut_evol Public

   Code for generating the main figures of Goldberg & Harris 2019 preprint

   R

5. mushi-pipelines mushi-pipelines Public

   Data analysis pipelines for the mushi paper

   Jupyter Notebook

6. elife_CAN1_paper elife_CAN1_paper Public

   code to generate plots for the 2021 eLife paper

   R