Code repository for the paper:
Helena Russello, Rik van der Tol, Menno Holzhauer, Eldert J. van Henten, Gert Kootstra, Video-based automatic lameness detection of dairy cows using pose estimation and multiple locomotion traits, Computers and Electronics in Agriculture, Volume 223, 2024, 109040, ISSN 0168-1699, https://doi.org/10.1016/j.compag.2024.109040. (https://www.sciencedirect.com/science/article/pii/S0168169924004319)
Install the conda environment:
conda env create -f environment-short.yml
Run the model:
python train_ml.py --config cfg/config.yml
You can add the path to your data in the config.yml file, and change the options as you wish.
The data_files contains examples of how to structure your dataset.
The code is provided as is, is not maintained, and support is currently not provided.
If you have questions, send an email to helena [dot] russello [at] wur [dot] nl.
!!! I may be slow to respond !!!
If using (part of) the code, please cite:
@article{RUSSELLO2024109040,
title = {Video-based automatic lameness detection of dairy cows using pose estimation and multiple locomotion traits},
journal = {Computers and Electronics in Agriculture},
volume = {223},
pages = {109040},
year = {2024},
issn = {0168-1699},
doi = {https://doi.org/10.1016/j.compag.2024.109040},
url = {https://www.sciencedirect.com/science/article/pii/S0168169924004319},
author = {Helena Russello and Rik {van der Tol} and Menno Holzhauer and Eldert J. {van Henten} and Gert Kootstra}
}