Releases: jengweitjiu/STRATA
Releases · jengweitjiu/STRATA
Release list
v0.1.0
STRATA v0.1.0 — Initial release
Spatial Transcription-factor Regulatory Architecture of Tissue Analysis.
- Layer 1: Continuous regulon fields from Xenium transcript coordinates
- Layer 2: Coupling tensor quantifying local co-regulation geometry
- Layer 3: Regulon Stability Index from Jacobian SVD
- Conjecture 5.1 validated: phase boundaries track tissue architecture (r=0.32, r=0.51)
- Melanoma coupling homogenization discovery (variance ↓28%)
- Parameter sensitivity: robust across all 12 BW × δ combinations
- Complete reproducible notebook (Colab, T4 GPU, ~20s runtime)
Data: 10x Genomics Xenium Human Skin Melanoma (382 genes, 13.7M transcripts, CC BY 4.0)