Ocean Data Parser

The ocean data parser has for primary objectif to streamline the data parsing the different oceanographic data format to a standard xarray object. This object can then easily be used for:

• Data Analysis
• NetCDF conversion
• Data Pipeline Ingestion

Installation

With miniconda, create a new environement:

conda create --name ocean_parser 

Get in the environment:

conda activate ocean_parser

Install the present package:

pip install git+https://github.com/HakaiInstitute/ocean-data-parser.git

For development, clone locally the package :

git clone git+https://github.com/HakaiInstitute/ocean-data-parser.git

and install the package:

cd ocean-data-parser
pip install -e .

For development purposes, it is recommended to install the development requirements:

pip install -e ".[dev]"

How to

To parse seabird file:

from ocean_data_parser.read import searbird

PATH_TO_SEABIRD_CNV = "PATH_TO_SEABIRD_CNV"
ds = seabird.cnv(PATH_TO_SEABIRD_CNV)