Modif GUI#514

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phcarl wants to merge 45 commits into

jungmannlab:developmentfrom

phcarl:modifGUI

Commits on Sep 19, 2024

Commits on Oct 3, 2024

Merge pull request #503 from jungmannlab/development
rafalkowalewski1
authored

Commits on Oct 15, 2024

proposal for GUI improvements
phcarl
committed

Commits on Jan 2, 2025

Commits on Feb 14, 2025

RESI dialog FIX, units in nm

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
display the last loaded file in Render after closing a channel

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
CLEAN; FIX - saved picked locs metadata total area for circular pick

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
CMD localize saves camera information in the metadata file

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Render show drift in nm

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Picasso: Render - masking localizations saves the mask area in metadata

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
AIM undrifting and applying drift from txt yield the same result

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Test clusterer keyboard tracking

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Change function inputs for render gui's (h)dbscan to match the pattern for smlm clusterer

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
AIM from CMD, remove --mode from CMD undrift

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Render: scale bar is automatically adjusted based on the current FOV's width

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
export channels in grayscale

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
FIX automatic scale bar

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Rotation window screenshot saves metadata and extra view with scale bar

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
automatic scalebar length adjustment for rotation window

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
CLEAN

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Bump version: 0.7.3 → 0.7.4

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
one click installer correct python version for pyinstaller compatibility

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
update plugin documentation

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Filter histogram bug fix - when IQR is zero, error was displayed

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
add (h)dbscan references to the main page

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
counting polygonal picks FIX

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
AIM docstrings and error message CLEAN

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
AIM on locs with frame filtered FIX

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
correct changelog

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
2D drift plot inverts y axis to match the rendered locs

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
3d animation fix

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
pick fiducials ADD

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
move undrift from picked to picasso.postprocess (formerly in picasso.gui.render.View)

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Bump version: 0.7.4 → 0.7.5

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
CLEAN

rafalkowalewski1
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
proposal for GUI improvements

Philippe Carl [IR CNRS] [Team D1MIGR]
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Update __main__.py

phcarl
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Update __main__.py

phcarl
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
resolve conflict

Philippe Carl [IR CNRS] [Team D1MIGR]
authored and
Philippe Carl [IR CNRS] [Team D1MIGR]
committed
Update rotation.py
phcarl
authored