Lab Data Ranger

Lab Data Ranger is a tool for managing and surveying lab data using the context of file trees.

Features

• Collect and manage file tree structures
• Extract and handle metadata for various file types
• Build graphs and load data into Neo4j for advanced queries

Installation

pip install -r requirements.txt

Configure database credentials

First copy the template database configuration file to a new file:

cp template_db_config.json db_config.json

The default in most functions and .gitignore is db_config.json, so that is recommended.

Then edit your new db_config.json in your editor of choice, updating for your own credentials.

Once this is set, you will no longer need to input your credentials in code.