GitHub - labordynamicsinstitute/ldilab-manual: New version of the manual

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 501 Commits
.devcontainer		.devcontainer
.github/workflows		.github/workflows
_static		_static
assets		assets
images		images
media		media
.gitignore		.gitignore
00-meetings.md		00-meetings.md
01-background.md		01-background.md
02-01-pre-requisites.md		02-01-pre-requisites.md
02-02-pre-training-tasks.md		02-02-pre-training-tasks.md
02-03-toolkit.md		02-03-toolkit.md
04-01-concepts.md		04-01-concepts.md
04-02-reproducible-practices.md		04-02-reproducible-practices.md
04-03-readme-template.md		04-03-readme-template.md
05-data-citations-and-das.md		05-data-citations-and-das.md
06-basic-flow.md		06-basic-flow.md
07-basic-assessing-reproducibility.md		07-basic-assessing-reproducibility.md
08-details-replication-report.md		08-details-replication-report.md
11-00-jira-workflow.md		11-00-jira-workflow.md
11-01-workflow-assigned.md		11-01-workflow-assigned.md
11-02-workflow-create-repo.md		11-02-workflow-create-repo.md
11-03-workflow-in-progress.md		11-03-workflow-in-progress.md
11-04-workflow-parta.md		11-04-workflow-parta.md
11-05-preparing-to-run-code.md		11-05-preparing-to-run-code.md
11-06-running-code.md		11-06-running-code.md
11-07-workflow-writing-report.md		11-07-workflow-writing-report.md
11-08-report-completed.md		11-08-report-completed.md
12-jira-revision-guidance.md		12-jira-revision-guidance.md
13-1-approving-issues-original.md		13-1-approving-issues-original.md
13-2-approving-issues-revision.md		13-2-approving-issues-revision.md
13-3-approving-recommendations.md		13-3-approving-recommendations.md
13-approving-issues.md		13-approving-issues.md
20-checking-unassigned-tickets.md		20-checking-unassigned-tickets.md
30-jira-prepare-publication.md		30-jira-prepare-publication.md
31-jira-openicpsr-setup.md		31-jira-openicpsr-setup.md
32-jira-submitting.md		32-jira-submitting.md
33-jira-delete-nda-data.md		33-jira-delete-nda-data.md
34-openicpsr-preparing.md		34-openicpsr-preparing.md
40-Instructions-PandP-Checks.md		40-Instructions-PandP-Checks.md
50-openicpsr-related-tasks.md		50-openicpsr-related-tasks.md
51-openicpsr-monitoring-pending.md		51-openicpsr-monitoring-pending.md
52-openicpsr-publishing-deposit.md		52-openicpsr-publishing-deposit.md
53-openicpsr-add-article-doi.md		53-openicpsr-add-article-doi.md
60-tips-for-identifying-differences.md		60-tips-for-identifying-differences.md
61-screenshot-windows.md		61-screenshot-windows.md
62-screenshot-macos.md		62-screenshot-macos.md
68-include-screenshots-in-report.md		68-include-screenshots-in-report.md
71-External-reproducibility-checks.md		71-External-reproducibility-checks.md
90-Glossary.md		90-Glossary.md
91-setup-checklist.md		91-setup-checklist.md
92-Privacy.md		92-Privacy.md
93-Communication.md		93-Communication.md
94-00-downloading-data.md		94-00-downloading-data.md
94-01-how-to-use-openICPSR-backend.md		94-01-how-to-use-openICPSR-backend.md
94-02-alternate-downloads.md		94-02-alternate-downloads.md
94-03-private-data.md		94-03-private-data.md
94-04-Updating_Materials.md		94-04-Updating_Materials.md
94-05-globus-transfers.md		94-05-globus-transfers.md
95-10-windows-remote.md		95-10-windows-remote.md
95-15-linux-remote.md		95-15-linux-remote.md
95-20-codeocean.md		95-20-codeocean.md
95-30-wholetale.md		95-30-wholetale.md
95-40-codespaces.md		95-40-codespaces.md
95-50-setup-bash.md		95-50-setup-bash.md
95-60-general-setup.md		95-60-general-setup.md
95_Access_to_computers.md		95_Access_to_computers.md
96-00-running-code.md		96-00-running-code.md
96-00-using-Stata.md		96-00-using-Stata.md
96-01-using-config-stata.md		96-01-using-config-stata.md
96-02-running-stata-code.md		96-02-running-stata-code.md
96-03-stata-scan-packages.md		96-03-stata-scan-packages.md
96-04-stata-on-linux.md		96-04-stata-on-linux.md
96-05-debugging-stata.md		96-05-debugging-stata.md
96-10-using-R.md		96-10-using-R.md
96-11-using-config-r.md		96-11-using-config-r.md
96-12-running-r-code.md		96-12-running-r-code.md
96-14-r-on-biohpc.md		96-14-r-on-biohpc.md
96-15-r-from-other.md		96-15-r-from-other.md
96-16-debugging-r.md		96-16-debugging-r.md
96-20-using-matlab.md		96-20-using-matlab.md
96-21-using-config-matlab.md		96-21-using-config-matlab.md
96-22-running-matlab-code.md		96-22-running-matlab-code.md
96-23-dynare-matlab.md		96-23-dynare-matlab.md
96-24-debugging-matlab.md		96-24-debugging-matlab.md
96-30-running-python-jupyter.md		96-30-running-python-jupyter.md
96-40-using-julia.md		96-40-using-julia.md
96-50-using-docker.md		96-50-using-docker.md
96-51-docker-windows.md		96-51-docker-windows.md
96-70-using-mathematica.md		96-70-using-mathematica.md
96-80-sundry.md		96-80-sundry.md
96-81-using-ox.md		96-81-using-ox.md
96-82-installing-add-ons.md		96-82-installing-add-ons.md
96-90-00-useful-scripts.md		96-90-00-useful-scripts.md
96-91-00-pipeline-intro.md		96-91-00-pipeline-intro.md
96-91-pipeline-overview.md		96-91-pipeline-overview.md
96-92-bitbucket-pipelines.md		96-92-bitbucket-pipelines.md
97-00-authentication.md		97-00-authentication.md
97-01-Bitbucket-authentication.md		97-01-Bitbucket-authentication.md
97-02-openicpsr-authentication.md		97-02-openicpsr-authentication.md