Search results

Overestimation of number of reads from nanopore data (flagstat)

Status: Open.

#31 In lh3/samtools;

· rebeelouise opened on Feb 19, 2021

samtools index wheat bam

Status: Open.

#30 In lh3/samtools;

· liubei8852 opened on Apr 1, 2020

No base called when reference is ambiguous

Status: Open.

#29 In lh3/samtools;

· snacktavish opened on Feb 20, 2019

FASTA alignment index retrieval

Status: Open.

#28 In lh3/samtools;

· kullrich opened on May 4, 2018

why we need to 'calmd' a bam file using Samtools ?

Status: Open.

#26 In lh3/samtools;

· zeronot opened on Mar 2, 2017

NONE

Status: Open.

#25 In lh3/samtools;

· WinterLi1993 opened on Sep 10, 2016

AD, ADR and ADF counters

Status: Open.

#24 In lh3/samtools;

· iranmdl opened on Apr 22, 2016

A question about samtools faidx

Status: Open.

#22 In lh3/samtools;

· WinterLi1993 opened on Dec 23, 2015

Argument for -m option in bcftools view when doing multi-sample variant calling

Status: Open.

#20 In lh3/samtools;

· huiminkang opened on Jan 6, 2014

view -s FLOAT only works for 0.5 or below

Status: Open.

#19 In lh3/samtools;

· avilella opened on Apr 24, 2013

errmod.c ln 83 typo?

Status: Open.

#13 In lh3/samtools;

· xied75 opened on Jun 7, 2012