Skip to content

Popular repositories Loading

  1. HistoGPT HistoGPT Public

    A vision language model for gigapixel whole slide images in histopathology

    Jupyter Notebook 91 20

  2. BaSiC BaSiC Public

    A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images

    MATLAB 65 16

  3. DinoBloom DinoBloom Public

    Blood Cell Foundation Model based on DINOv2

    Python 64 10

  4. DomainLab DomainLab Public

    modular domain generalization: https://pypi.org/project/domainlab/

    Python 45 3

  5. InstantDL InstantDL Public

    InstantDL: An easy and convenient deep learning pipeline for image segmentation and classification

    Python 44 8

  6. SHAPR_torch SHAPR_torch Public

    SHAPR: Code for "Capturing Shape Information with Multi-Scale Topological Loss Terms for 3D Reconstruction"

    Python 41 7

Repositories

Showing 10 of 51 repositories
  • DinoBloom Public

    Blood Cell Foundation Model based on DINOv2

    marrlab/DinoBloom’s past year of commit activity
    Python 64 Apache-2.0 10 3 0 Updated Jan 29, 2026
  • HematoFatePrediction Public

    Code accompanying "Prospective identification of hematopoietic lineage choice by deep learning", Nature methods 2017, DOI:10.1038/nmeth.4182

    marrlab/HematoFatePrediction’s past year of commit activity
    MATLAB 20 6 0 1 Updated Dec 18, 2025
  • cAItomorph Public

    cAItomorph: Hematological Diagnostics from Peripheral Blood Cytomorphology

    marrlab/cAItomorph’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Oct 17, 2025
  • causalspyne Public

    Python data generation tool with unobserved confounding as testbed for causal discovery and causal abstraction

    marrlab/causalspyne’s past year of commit activity
    Python 3 0 8 (1 issue needs help) 1 Updated Oct 16, 2025
  • aNCA Public
    marrlab/aNCA’s past year of commit activity
    Python 3 0 0 0 Updated Oct 6, 2025
  • NCA-WSS Public
    marrlab/NCA-WSS’s past year of commit activity
    Python 1 0 0 0 Updated Sep 23, 2025
  • HistoGPT Public

    A vision language model for gigapixel whole slide images in histopathology

    marrlab/HistoGPT’s past year of commit activity
    Jupyter Notebook 91 Apache-2.0 20 2 0 Updated Sep 4, 2025
  • RedTell Public
    marrlab/RedTell’s past year of commit activity
    Python 9 5 1 0 Updated Jul 24, 2025
  • marrlab/CAR_T_TargetExpression’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated May 12, 2025
  • LVLM_cytomorphology_eval Public

    Evaluation of large vision language models on cytomorphology tasks

    marrlab/LVLM_cytomorphology_eval’s past year of commit activity
    0 0 0 0 Updated Apr 23, 2025

Most used topics

Loading…