v0.9.0.3

What's Changed

• Keep first empty bgzf block in index. Add tests, closes #238 by @mdshw5 in #239

This release fixes a bug in the new BGZF indexing strategy. Anyone using v0.9.0-v0.9.0.2 should upgrade. Thanks @chtsai0105!

Full Changelog: v0.9.0.2...v0.9.0.3

v0.9.0.2

What's Changed

• Add test case for issue described in #228 by @mdshw5 in #233
• Work on test coverage by @mdshw5 in #234
• Add tests for FastaVariant and sequence masking by @mdshw5 in #235
• feat: Add long name support for bgzf files by @ggydush in #237

Full Changelog: v0.9.0.1...v0.9.0.2

v0.9.0.1

What's Changed

• feat: Add bgzip index support for fsspec objects by @ggydush in #232

New Contributors

• @ggydush made their first contribution in #232

Full Changelog: v0.9.0...v0.9.0.1

v0.9.0

What's Changed

• Detect and preserve original line terminator characters (closes #170) by @mdshw5 in #227
• Update test data and tests fixes #230 by @mdshw5 in #231
• Support for constructing and using GZI format files for BGZF compressed FASTA by @mdshw5 in #164

Full Changelog: v0.8.2...v0.9.0

v0.8.2

What's Changed

• fix: check for file before closing in exit by @kdm9 in #229

New Contributors

• @kdm9 made their first contribution in #229

Full Changelog: v0.8.1.4...v0.8.2

v0.8.1.4

What's Changed

• Remove Depsy from README by @mdshw5 in #225
• do not needlessly require importlib_metadata by @a-detiste in #226

Full Changelog: v0.8.1.3...v0.8.1.4

v0.8.1.3

What's Changed

• remove setuptools from runtime dependencies by @emollier in #224

Full Changelog: v0.8.1.2...v0.8.1.3

v0.8.1.2

What's Changed

• Update documentation for get_seq which uses 1-based closed intervals by @eroller in #222
• Add packaging library for #220 by @mdshw5 in #223

New Contributors

• @eroller made their first contribution in #222

Full Changelog: v0.8.1.1...v0.8.1.2

v0.8.1.1

This is a minor correction to the bgzip example from #216. Thanks @jmarshall!

v0.8.1

What's Changed

• Better message about bgzip compression errors: Update init.py by @rraadd88 in #216

New Contributors

• @rraadd88 made their first contribution in #216

Full Changelog: v0.8.0...v0.8.1