It is swooping season!

It is swooping season!

The 'humble' Australian magpie is renowned for "swooping" (attacking) by passers during their baby season. In honour of the magpie swooping season we overhauled Magphi and implemented some changes to make it a bit easier to use outputs and increase its scope of use.

What's Changed

• tblastn implemented as alternative to default blastn. This allows the use of amino acid seeds using -p. Thanks to Andrew (@BiologicalScientist)
• Default behaviour is now to reorient fasta and gff files based on the same seed across genomes. This the same orientation in relation to stand and sequence, allowing for easier alignment of outputs.