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Upload ThermoPCD #1

Description

@PelochoV

Upload data from ThermoPCD

Problems:

  • CD27_2 replica 1 corrupted? gmx check -f replica_1/md_0_10.xtc
  • no xtc:
    • CD28
    • PD-1_2: seed 2 y 3
    • PD-1_6: seed 1, replicas 2-4
    • durvalumab: seed 1 replica 2
    • IL-1β
    • IL-16: seed 5 replica 2 shorter
  • PD-1_3: 3ª MD xtc only 7.5 MB
  • PD-1_6: pdb and xtc atom count mismatch
  • CD137 xtc solo 140mb
  • COMP-epitope_P6 replicas 9-12. Wrong topology. H with 3 bonds
  • TNF-α_2: 7-9: topology problem
  • Image
  • TNF-α: seed 2 replica 4, error DOI link
  • GM-CSF_2: RMSD jumps in 5,8,11.

TO-DO

  • Upload
  • Publish
  • Storage at data/mmb?

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