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  1. BirolLab/abyss BirolLab/abyss Public

    🔬 Assemble large genomes using short reads

    C++ 328 111

  2. BirolLab/ntCard BirolLab/ntCard Public

    Estimating k-mer coverage histogram of genomics data

    C++ 77 9

  3. BirolLab/btl_bloomfilter BirolLab/btl_bloomfilter Public

    The BTL C/C++ Common bloom filters for bioinformatics projects, as well as any APIs created for other programming languages.

    C++ 18 5

  4. BirolLab/ntHash BirolLab/ntHash Public

    Fast hash function for DNA/RNA sequences

    C++ 106 15

  5. BirolLab/dida BirolLab/dida Public

    DIDA Project

    C++ 2 2

  6. BirolLab/ChopStitch BirolLab/ChopStitch Public

    Finding putative exons and constructing splicegraphs using Trans-ABySS contigs

    C++ 11 1