Search results

How to get inner product score for each cell?

Status: Open.

#241 In morris-lab/CellOracle;

· daisyyr opened on Dec 27, 2025

Questions on simulating non-TF knockout

Status: Open.

#239 In morris-lab/CellOracle;

· lh12565 opened on Oct 22, 2025

isolate after a pertubation its impasct on the different genes

Status: Open.

#238 In morris-lab/CellOracle;

· A-legac45 opened on Sep 5, 2025

Are the p-values that are generated with get_links function adjusted for multiple testing?

Status: Open.

#237 In morris-lab/CellOracle;

· yasin-uzun opened on Sep 2, 2025

Scalability Issues of CellOracle

Status: Open.

#236 In morris-lab/CellOracle;

· cconnors8 opened on Jul 24, 2025

how to used a snATACseq ARCHR already process in CellOralce

Status: Open.

#235 In morris-lab/CellOracle;

· A-legac45 opened on Jun 10, 2025

ImportError: celloracle/lib/python3.10/site-packages/velocyto/speedboosted.cpython-310-x86_64-linux-gnu.so: undefined symbol: __log10_finite

Status: Open.

#234 In morris-lab/CellOracle;

· WuMath opened on May 5, 2025

velocyto broken and abandoned - switch to STARSolo?

Status: Open.

#233 In morris-lab/CellOracle;

· aowenson-imm opened on Apr 28, 2025

Confusion in oracle.transition_prob

Status: Open.

#232 In morris-lab/CellOracle;

· Peg-Wu opened on Apr 23, 2025

problem in interpreting network analysis result

Status: Open.

#231 In morris-lab/CellOracle;

· GGboy-Zzz opened on Apr 9, 2025

Failed to build installable wheels for some pyproject.toml based projects (gimmemotifs)

Status: Open.

#230 In morris-lab/CellOracle;

· RyanLi2004-Bio opened on Mar 5, 2025

Pseudotime calculation using CytoTRACE

Status: Open.

#229 In morris-lab/CellOracle;

· yuxi010 opened on Feb 27, 2025