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1. Chronophage Chronophage Public

   Code for the publication Redhai & Hirschmüller et al., 2026

   HTML 1 1

2. DGEvistools DGEvistools Public

   Small R package with some functions to visualize DGE results downstream of DESeq2

   R 12

3. GermlineMutationCalling GermlineMutationCalling Public

   An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM files

   Python 11 1

4. ClusterMonitor ClusterMonitor Public

   Very simple script which logs the CPU and RAM usage of the submitted job.

   Python 28 4

5. PhraseBase PhraseBase Public

   Program which searches through thousands of papers and tries to match a certain input string

   Python 13 2

6. MarioniLab/miloR MarioniLab/miloR Public

   R package implementation of Milo for testing for differential abundance in KNN graphs

   R 448 28