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NYGC Technology Innovation

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README.md

Vickovic Lab @ New York Genome Center

overview
lab website

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PySeq2500 PySeq2500 Public

Control an Illumina HiSeq 2500 System

Python 20 11
hudson hudson Public

Pyseq 4i spatial pipeline

Python 2 2
shmseq shmseq Public

Jupyter Notebook 8

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Showing 10 of 14 repositories

abcSplotch Public
Approximate Bayesian inference of spatial cellular gene expression conditioned on covariates of interest

nygctech/abcSplotch’s past year of commit activity

Python 0 0 0 0 Updated Feb 13, 2026
hudson Public
Pyseq 4i spatial pipeline

nygctech/hudson’s past year of commit activity

Python 2 GPL-3.0 2 4 1 Updated Feb 10, 2026
celery-pipeline Public

nygctech/celery-pipeline’s past year of commit activity

Python 0 0 0 0 Updated Dec 29, 2025
.github Public

nygctech/.github’s past year of commit activity

0 0 0 0 Updated Nov 23, 2025
INLAomics Public
Bayesian Hierchical models for multiomic spatial transcriptomics using INLA

nygctech/INLAomics’s past year of commit activity

HTML 0 MIT 0 0 0 Updated Oct 20, 2025
pyseq-image Public

nygctech/pyseq-image’s past year of commit activity

Python 0 GPL-3.0 0 3 0 Updated Apr 2, 2025
PySeq2500 Public
Control an Illumina HiSeq 2500 System

nygctech/PySeq2500’s past year of commit activity

Python 20 MIT 11 0 6 Updated Oct 22, 2024
shmseq Public

nygctech/shmseq’s past year of commit activity

Jupyter Notebook 8 BSD-3-Clause 0 0 0 Updated Feb 3, 2024
PICASSO Public
Development of PICASSO plugin for napari

nygctech/PICASSO’s past year of commit activity

Jupyter Notebook 16 GPL-3.0 3 3 0 Updated Jan 17, 2023
Kedmi-CITEseq Public
Code for the Kedmi et al paper

nygctech/Kedmi-CITEseq’s past year of commit activity

Jupyter Notebook 0 0 1 0 Updated Aug 15, 2022

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