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45 changes: 0 additions & 45 deletions .travis.yml

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8 changes: 3 additions & 5 deletions LICENSE
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This is part of the OpenMM molecular simulation toolkit originating from
Simbios, the NIH National Center for Physics-Based Simulation of
Biological Structures at Stanford, funded under the NIH Roadmap for
Medical Research, grant U54 GM072970. See https://simtk.org.
This is part of the OpenMM molecular simulation toolkit.
See https://openmm.org/development.

Portions copyright (c) 2013 Stanford University and the Authors.
Portions copyright (c) 2013-2025 Stanford University and the Authors.
Authors: Peter Eastman
Contributors:

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2 changes: 1 addition & 1 deletion Manual.html
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</head>
<body>
<h1 style="text-align:center">PDBFixer</h1>
<div style="text-align:center">Copyright 2013-2023 by Peter Eastman and Stanford University</div>
<div style="text-align:center">Copyright 2013-2025 by Peter Eastman and Stanford University</div>

<h1>1. Introduction</h1>

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4 changes: 0 additions & 4 deletions devtools/conda-recipe/build.sh

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31 changes: 0 additions & 31 deletions devtools/conda-recipe/meta.yaml

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6 changes: 2 additions & 4 deletions devtools/createSoftForcefield.py
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createSoftForceField.py: Creates a force field XML file that is suitable
for removing clashes in very badly strained systems.

This is part of the OpenMM molecular simulation toolkit originating from
Simbios, the NIH National Center for Physics-Based Simulation of
Biological Structures at Stanford, funded under the NIH Roadmap for
Medical Research, grant U54 GM072970. See https://simtk.org.
This is part of the OpenMM molecular simulation toolkit.
See https://openmm.org/development.

Portions copyright (c) 2013 Stanford University and the Authors.
Authors: Peter Eastman
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6 changes: 0 additions & 6 deletions devtools/travis-ci/README.md

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43 changes: 0 additions & 43 deletions devtools/travis-ci/after_success.sh

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1 change: 0 additions & 1 deletion devtools/travis-ci/index.html

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23 changes: 0 additions & 23 deletions devtools/travis-ci/install.sh

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48 changes: 0 additions & 48 deletions devtools/travis-ci/push-docs-to-s3.py

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6 changes: 2 additions & 4 deletions pdbfixer/pdbfixer.py
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"""
pdbfixer.py: Fixes problems in PDB files

This is part of the OpenMM molecular simulation toolkit originating from
Simbios, the NIH National Center for Physics-Based Simulation of
Biological Structures at Stanford, funded under the NIH Roadmap for
Medical Research, grant U54 GM072970. See https://simtk.org.
This is part of the OpenMM molecular simulation toolkit.
See https://openmm.org/development.

Portions copyright (c) 2013-2025 Stanford University and the Authors.
Authors: Peter Eastman
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