feat(clinical): use reports with flag to build indications and evidence

[ireneisdoomed]

This PR includes:

• Upgrade clinical_mining to 0.6.3 and adjustments in the clinical_report step
• Added two new flags in clinical_indication: NO_DISEASE and NO_DRUG to track cases where the diseases or drugs arrays come empty as a result of the extraction
  • 796 reports without diseases
  • 0 reports without drugs
• Changed logic for INDIRECT_PRIMARY_PURPOSE: here we are using the drug_intent field we extracted with the LLM work: 113,636 reports have this flag now.
• Removed UNVALIDATED_INDICATION as a QC flag for evidence_clinical_precedence and clinical_indication (more about this on the ticket)

qualityControls | count
-- | --
list[str] | u32
null | 137268
["INDIRECT_PRIMARY_PURPOSE"] | 86432
["UNVALIDATED_INDICATION"] | 27286
["INDIRECT_PRIMARY_PURPOSE", "NO_DISEASE"] | 21190
["PHASE_IV_NOT_APPROVED"] | 6673
["PHASE_IV_NOT_APPROVED", "UNVALIDATED_INDICATION"] | 4279
["INDIRECT_PRIMARY_PURPOSE", "UNVALIDATED_INDICATION"] | 3621
["INDIRECT_PRIMARY_PURPOSE", "PHASE_IV_NOT_APPROVED"] | 1577
["INDIRECT_PRIMARY_PURPOSE", "PHASE_IV_NOT_APPROVED", "UNVALIDATED_INDICATION"] | 816
["NO_DISEASE"] | 796

[DSuveges]

All changes makes sense. I'm moving the relevant configurations to orchestration 26.06 branch.