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    8 repositories

    • .github

      Public
      0•0•0•0•Updated Mar 27, 2026Mar 27, 2026

    • Ab-binding

      Public
      Identify antibodies binding the same epitope
      Python
      •
      MIT License
      •0•4•0•0•Updated Feb 10, 2026Feb 10, 2026

    • MOSAIC

      Public
      MOSAIC: Scalable Stochastic Simulation with Heterogeneous and Non-Markovian Agents
      Python
      •
      MIT License
      •1•1•0•0•Updated Jan 23, 2026Jan 23, 2026

    • RA-drug-discovery

      Public
      Cell-type Specific Gene Networks and Drivers in Rheumatoid Arthritis
      Python
      •0•1•0•0•Updated Sep 25, 2025Sep 25, 2025

    • REGIR

      Public
      A practical and scalable Gillespie Algorithm for complex non-Markovian Stochastic Simulations, with applications to systems biology.
      Python
      •
      MIT License
      •0•2•0•0•Updated Sep 3, 2025Sep 3, 2025

    • Raman-Imaging-Processing

      Public
      Provide libraries to process Hyperspectral Raman images, including batch effect correction with non cell region estimation and subtraction.
      Python
      •2•3•0•0•Updated Feb 16, 2025Feb 16, 2025

    • cdiversity

      Public
      A Python library for computing clonal relationship and diversity in B cell repertoire data
      Python
      •
      MIT License
      •0•2•0•0•Updated May 16, 2023May 16, 2023

    • Germinal-Center

      Public
      A Probabilistic agent based model of the Germinal Center reaction, with explicit modeling of mutations in the B cell receptors sequences.
      Python
      •
      MIT License
      •0•2•0•0•Updated May 16, 2020May 16, 2020
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