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@ActiveBrainAtlas2 Active Brain Atlas

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    7 repositories

    • neuropixels_trajectory_explorer

      Public
      MATLAB
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 15, 2023Dec 15, 2023

    • preprocessing-pipeline

      Public
      This repository contains the code for the image processing sequence. Starting from the raw images from the scanner through the generation of the tiled images fo…
      python
      python
      Jupyter Notebook
      •3•1•1•14•Updated Oct 6, 2023Oct 6, 2023

    • neuroglancer

      Public
      The ActiveBrainAtlas fork of the Neuroglancer project. This fork includes all the functionality of the main branch plus our REST API database integration.
      TypeScript
      •
      Apache License 2.0
      •1•1•0•0•Updated Jun 9, 2023Jun 9, 2023

    • activebrainatlasadmin

      Public
      This is the ActiveBrainAtlas database portal. This project provides the admin area to edit data associated with the Active Brain Atlas project. It also provides…
      python
      python
      Jupyter Notebook
      •1•0•75•13•Updated Jun 2, 2023Jun 2, 2023

    • abakit

      Public
      This repository contains methods for use in the Django database portal and the image processing pipeline.
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 22, 2023Apr 22, 2023

    • cell_extractor

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Jan 19, 2023Jan 19, 2023

    • DKCell

      Public
      This is a fork of the CSHL cell detector. It uses tensorflow and keras.
      MATLAB
      •
      MIT License
      •1•0•0•0•Updated Jan 17, 2022Jan 17, 2022
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