Repositories list

• poseforge

  Public
  Simulation-based zero-label pose estimation for Drosophila melanogaster

  Python

  •00 forks•11 star•33 issues•11 pull request•Updated May 1, 2026May 1, 2026

• ballpushing_utils

  Public
  This is a package containing modules to load, process and analyse ball pushing experiment.

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•1414 pull requests•Updated May 1, 2026May 1, 2026

• ballpushing_utils_highres

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 30, 2026Apr 30, 2026

• spotlight-tools

  Public
  Python

  •00 forks•00 stars•33 issues•00 pull requests•Updated Apr 29, 2026Apr 29, 2026

• cobar-2026

  Public
  BIOENG 456: Controlling Behavior in Animals and Robots

  Jupyter Notebook

  •

  Apache License 2.0

  •88 forks•00 stars•00 issues•00 pull requests•Updated Apr 28, 2026Apr 28, 2026

• spotlight-control

  Public
  Control software for the Spotlight recording platform

  behaviorhardware

  behaviorhardware

  C++

  •

  GNU General Public License v3.0

  •00 forks•00 stars•33 issues•00 pull requests•Updated Apr 28, 2026Apr 28, 2026

• claude-code-usage

  Public
  Slack bot to expose access to Claude usage and cost APIs, which ordinarily require an admin API key.

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 27, 2026Apr 27, 2026

• flygym

  Public
  Simulating embodied sensorimotor control with NeuroMechFly v2

  biomechanicsphysics-simulationmujoco+ 3

  biomechanicsphysics-simulationmujocopublished-articleneuroaistable-infrastructure

  Python

  •

  Apache License 2.0

  •2323 forks•150150 stars•1010 issues•33 pull requests•Updated Apr 22, 2026Apr 22, 2026

• contrastive-unpaired-translation

  Public
  Contrastive unpaired image-to-image translation, faster and lighter training than cyclegan (ECCV 2020, in PyTorch)

  Python

  •

  Other

  •446446 forks•00 stars•00 issues•00 pull requests•Updated Apr 22, 2026Apr 22, 2026

• utils_behavior

  Public
  Utility functions to manipulate and analyze behavior videos and associated data (tracking...) acquired in various setups and settings.

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 20, 2026Apr 20, 2026

• flycontrol

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• flygym-v2

  Public archive
  **ARCHIVE ONLY** See https://github.com/NeLy-EPFL/flygym instead.

  Python

  •

  Apache License 2.0

  •2323 forks•33 stars•00 issues•11 pull request•Updated Apr 4, 2026Apr 4, 2026

• flygym-gymnasium

  Public
  Fork of the older 1.x.x API of FlyGym.

  Python

  •

  Apache License 2.0

  •2323 forks•00 stars•00 issues•00 pull requests•Updated Apr 2, 2026Apr 2, 2026

• _media

  Public
  This repository is for larger media files (eg. GIFs/videos on the README).

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 30, 2026Mar 30, 2026

• neuromechants

  Public
  Trying to build body models for AntScan in MuJoCo?

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 22, 2026Mar 22, 2026

• antennal-grooming

  Public
  Repository hosting the analysis code for Ozdil et al 2024.

  Jupyter Notebook

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 20, 2026Mar 20, 2026

• spotlight-poseforge-paper

  Public
  Python

  •00 forks•00 stars•11 issue•22 pull requests•Updated Mar 16, 2026Mar 16, 2026

• DeMotion5D

  Public
  Remove sample movement from 5D microscopy data (xyz+time+color)

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 8, 2026Mar 8, 2026

• DeepFly3D

  Public
  Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.

  deep-learningmotion-capturepose-estimation+ 2

  deep-learningmotion-capturepose-estimationdrosophila-melanogasterpublished-article

  Jupyter Notebook

  •

  GNU Lesser General Public License v3.0

  •1717 forks•9999 stars•55 issues•22 pull requests•Updated Mar 7, 2026Mar 7, 2026

• sequential-inverse-kinematics

  Public
  Sequential inverse kinematics pipeline.

  inverse-kinematicsdrosophila-melanogaster

  inverse-kinematicsdrosophila-melanogaster

  Python

  •

  Apache License 2.0

  •00 forks•1515 stars•22 issues•00 pull requests•Updated Feb 24, 2026Feb 24, 2026

• plot-neurons

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 18, 2026Feb 18, 2026

• fictrac

  Public
  FicTrac: A webcam-based method for tracking spherical motion and generating fictive animal paths.

  C++

  •

  Other

  •3939 forks•00 stars•00 issues•00 pull requests•Updated Feb 2, 2026Feb 2, 2026

• Tracking_Analysis

  Public
  This repository comprises a set of tools used to perform tracking on behaviour arena data, analysis and plotting.

  active-dev

  active-dev

  Jupyter Notebook

  •

  MIT License

  •00 forks•11 star•11 issue•00 pull requests•Updated Jan 15, 2026Jan 15, 2026

• vnc_networks

  Public
  Code to analyse different connectomes

  connectome

  connectome

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•88 issues•00 pull requests•Updated Dec 15, 2025Dec 15, 2025

• scitas-util

  Public
  Utilities for running jobs on SCITAS

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 22, 2025Nov 22, 2025

• ballpushing_simulation

  Public
  Set of tools for individual based model of ball pushing behavior

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 10, 2025Nov 10, 2025

• multimaze_recorder

  Public
  Tools to operate Matthias' high-throughput recording setup

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 20, 2025Oct 20, 2025

• neuromechfly-live

  Public
  A game to control neuromechfly through a short track with different control strategies

  outreachflygym

  outreachflygym

  Python

  •

  Apache License 2.0

  •00 forks•11 star•22 issues•00 pull requests•Updated Sep 19, 2025Sep 19, 2025

• sleap_tools

  Public
  A repository to regroup useful code to manipulate sleap objects and h5 exports, as well as help and method to setup tracking routines.

  Jupyter Notebook

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 26, 2025Aug 26, 2025

• PyBundleAdjustment

  Public
  Triangulate 2D poses from multiple cameras to get camera locations and 3D poses

  published-article

  published-article

  Jupyter Notebook

  •22 forks•11 star•00 issues•11 pull request•Updated Jul 30, 2025Jul 30, 2025