Skip to content

@UTHSCSA-CIRD Clinical Informatics Research Division

Change the repository type filter

All

    Repositories list

    35 repositories

    • chinotype

      Public
      General purpose script for looking for over and under represented EHR facts in an i2b2 patient-set. Can be used for finding healthcare outcomes disparities, com…
      ehri2b2disparities
      ehri2b2disparities
      Python
      •0•2•3•2•Updated Jan 20, 2023Jan 20, 2023

    • datafinisher

      Public
      i2b2i2b2-plugins
      i2b2i2b2-plugins
      Python
      •0•0•1•0•Updated Jul 23, 2020Jul 23, 2020

    • paper01_rai

      Public
      The data analysis portion of the RAI code.
      R
      •
      MIT License
      •1•0•0•0•Updated Mar 27, 2019Mar 27, 2019

    • deb_dw_rebrand

      Public
      CSS
      •0•0•0•0•Updated Nov 10, 2018Nov 10, 2018

    • GPC-Weight-Health-Survey

      Public
      CSS
      •
      GNU General Public License v3.0
      •0•0•15•0•Updated Sep 5, 2018Sep 5, 2018

    • CDMPullDataSets

      Public
      Pull the CDM data sets instead of creating views
      SAS
      •1•0•0•1•Updated Aug 7, 2018Aug 7, 2018

    • addressfix

      Public
      Wrapper for a couple of address parsing/standardizing libraries for the purpose of cleaning up addresses in CSV files.
      wrappercsv-filesaddress-parsing
      wrappercsv-filesaddress-parsing
      Python
      •
      MIT License
      •0•1•0•0•Updated May 30, 2018May 30, 2018

    • paper_kidneycancer

      Public
      R
      •
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated May 16, 2018May 16, 2018

    • i2b2

      Public
      Local i2b2 user community
      0•0•0•0•Updated May 5, 2018May 5, 2018

    • grant_01_kidneycancer

      Public
      Preliminary data for Ron Rodriguez et al. R21 disparities grant for Kidney Cancer
      R
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 10, 2018Feb 10, 2018

    • 2017-fall-TSCI-5050

      Public
      TSCI 5050, Introduction to Data Science, Fall 2017
      R
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 12, 2017Dec 12, 2017

    • HCUP-ETL

      Public
      MIT License
      •0•0•1•0•Updated Oct 20, 2017Oct 20, 2017

    • HIV-Simulation

      Public
      HIV Transmission ABM
      Java
      •0•2•0•0•Updated Oct 20, 2017Oct 20, 2017

    • paper_falls_in_elderly

      Public
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated May 12, 2017May 12, 2017

    • 2017-Spring-TSCI-5050

      Public
      R
      •0•0•0•0•Updated May 9, 2017May 9, 2017

    • Cird_util_cohort_fact

      Public
      Utility function for adding a cohort fact from an I2B2 Query.
      PLSQL
      •0•0•0•0•Updated May 3, 2017May 3, 2017

    • GPC-height-weight-manuscript

      Public
      healthsurvey-dataweight
      healthsurvey-dataweightpatientsgpc
      0•1•0•0•Updated Apr 12, 2017Apr 12, 2017

    • i2p-transform

      Public
      i2b2 to PCORnet Common Data Model Transformation - requires i2b2 PCORnet ontology
      PLSQL
      •
      Other
      •16•0•0•0•Updated Dec 10, 2016Dec 10, 2016

    • allostatic_loadtest

      Public
      R
      •
      GNU Lesser General Public License v2.1
      •1•0•1•0•Updated Dec 8, 2016Dec 8, 2016

    • 2016-Fall-TSCI-5050

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Dec 7, 2016Dec 7, 2016

    • datafinisher_backup

      Public
      Python
      •3•0•2•0•Updated Oct 4, 2016Oct 4, 2016

    • TABSIE

      Public
      Table Ananlyzer, Browser, and Summarizer for Informatics Exploration
      CSS
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 29, 2016Sep 29, 2016

    • TDG

      Public
      Tabsie Data Generator
      R
      •0•0•0•0•Updated Sep 7, 2016Sep 7, 2016

    • i2b2_configs

      Public
      (local) tools and templates for deploying i2b2 and SHRINE
      XSLT
      •0•0•0•0•Updated Jul 13, 2016Jul 13, 2016

    • TSCI-5050

      Public
      Course: TSCI 5050, Introduction to Data Science
      R
      •
      Creative Commons Zero v1.0 Universal
      •8•0•1•0•Updated May 16, 2016May 16, 2016

    • rando

      Public
      Random variable generation by creating random functions in R
      R
      •
      GNU Lesser General Public License v2.1
      •0•0•0•0•Updated May 4, 2016May 4, 2016

    • PullMatches

      Public
      Java app matching algorithms
      Java
      •0•0•0•0•Updated Apr 14, 2016Apr 14, 2016

    • Rcasematch

      Public
      R package of functions useful for finding a control group for a cohort of interest, particularly when analyzing retrospective EHR data
      R
      •
      GNU Lesser General Public License v2.1
      •1•0•0•0•Updated Apr 12, 2016Apr 12, 2016

    • databuilder_automate

      Public
      Scripts to automate data builder / data finisher
      Python
      •0•1•0•0•Updated Dec 21, 2015Dec 21, 2015

    • PrelimA

      Public
      R
      •0•0•0•0•Updated Dec 17, 2015Dec 17, 2015
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.