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    • Rust
      0000Updated Apr 21, 2026Apr 21, 2026
    • extracTR

      Public
      Python
      MIT License
      0000Updated Mar 11, 2026Mar 11, 2026
    • ArraySplitter: De Novo Decomposition of Satellite DNA Arrays into Monomers within Telomere-to-Telomere Assemblies
      Python
      MIT License
      0110Updated Mar 11, 2026Mar 11, 2026
    • Python
      MIT License
      0000Updated Feb 8, 2026Feb 8, 2026
    • satellome

      Public
      Python
      MIT License
      07110Updated Jan 31, 2026Jan 31, 2026
    • morphoBPE

      Public
      Python
      MIT License
      0000Updated Jan 21, 2026Jan 21, 2026
    • TRF

      Public
      Tandem Repeats Finder: a program to analyze DNA sequences
      C
      GNU Affero General Public License v3.0
      33000Updated Nov 5, 2025Nov 5, 2025
    • MIT License
      0000Updated Oct 2, 2025Oct 2, 2025
    • Python
      MIT License
      0000Updated Sep 29, 2025Sep 29, 2025
    • TRAKD

      Public
      C++
      MIT License
      0000Updated Jul 3, 2025Jul 3, 2025
    • GenomNomNom – A playful tool for munching through genomes: finds genes, counts start/stop codons, analyzes ORFs, and compares annotation strategies.
      Python
      MIT License
      0300Updated Jun 5, 2025Jun 5, 2025
    • TokPos

      Public
      MIT License
      0000Updated Apr 23, 2025Apr 23, 2025
    • CsCl

      Public
      C++
      MIT License
      0000Updated Apr 1, 2025Apr 1, 2025
    • yatomat

      Public
      Python
      MIT License
      0000Updated Jan 14, 2025Jan 14, 2025
    • MIT License
      0700Updated Jan 14, 2025Jan 14, 2025
    • dnaBPE

      Public
      C++
      MIT License
      0500Updated Dec 9, 2024Dec 9, 2024
    • Tools

      Public
      Python
      0100Updated Sep 23, 2024Sep 23, 2024
    • MIT License
      0100Updated Aug 26, 2024Aug 26, 2024
    • Draft of the practice for genome bioinformatics
      MIT License
      0250Updated Mar 28, 2024Mar 28, 2024
    • HTML
      34200Updated Dec 9, 2023Dec 9, 2023
    • Wonderful O-antigens Operons Finder
      Jupyter Notebook
      MIT License
      0212Updated Sep 30, 2023Sep 30, 2023
    • Creative Commons Zero v1.0 Universal
      0000Updated Sep 15, 2023Sep 15, 2023
    • XAP_2023

      Public
      X-AP: Experimental Anatomy of Python
      Creative Commons Zero v1.0 Universal
      0000Updated Sep 5, 2023Sep 5, 2023
    • HiCPilot

      Public
      Jupyter Notebook
      MIT License
      0000Updated Aug 13, 2023Aug 13, 2023
    • Jupyter Notebook
      MIT License
      0000Updated Aug 13, 2023Aug 13, 2023
    • MIT License
      0000Updated Jun 19, 2023Jun 19, 2023
    • beyondT2T

      Public
      MIT License
      0000Updated Jun 19, 2023Jun 19, 2023
    • Primates

      Public
      Complete assemblies of non-human primate genomes
      Other
      4100Updated May 9, 2023May 9, 2023
    • Reassembly and annotation of Thiomargarita magnifica
      HTML
      0040Updated May 1, 2023May 1, 2023
    • DNA and tokens
      C++
      1000Updated Apr 6, 2023Apr 6, 2023
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