Repositories list

• binhe-lab-pub

  Public
  lab website of Bin He, Assistant Professor of Biology at the University of Iowa

  Less

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 18, 2026May 18, 2026

• E039-Fungal-ITS-Species-ID

  Public
  ITS sequencing to identify yeast species

  Python

  •11 fork•11 star•00 issues•11 pull request•Updated May 17, 2026May 17, 2026

• E041-yeast-viability-assay

  Public
  This is the repository for the FungaLight Yeast Live/Dead Assay. This project uses R to analyze high dimensional flow cytometry data, and correlates flow live p…

  HTML

  •11 fork•00 stars•00 issues•00 pull requests•Updated Apr 6, 2026Apr 6, 2026

• 2025-PhoU-Evolution

  Public
  collaboration with Thomas Kehl-Fie and Caroline Vermilya in the Micro and Immunology Dept

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 11, 2025Dec 11, 2025

• E036-ASR-H2O2

  Public
  Acquired Stress Resistance for H2O2, evolution of in yeasts

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 24, 2025Jul 24, 2025

• lab-protocols

  Public
  A collection of protocols for the lab

  SCSS

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 12, 2025Jun 12, 2025

• E039-evolution-OSR

  Public
  evolution of oxidative stress resistance and response in budding yeasts

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 12, 2025Jun 12, 2025

• C044-IDR-Evolution

  Public
  evolution of the intrinsically disordered regions (IDRs) in the eukaryotic transcription factor Pho4 in the budding yeasts

  HTML

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 12, 2025Jun 12, 2025

• C037-Cand-auris-adhesin

  Public
  HTML

  •22 forks•11 star•55 issues•00 pull requests•Updated Jun 12, 2025Jun 12, 2025

• E013-Pho4-evolution

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 26, 2025Apr 26, 2025

• E042-CTA1-promoter-dissect

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 6, 2024Jul 6, 2024

• yeast-adhesin-family-evolution

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Aug 20, 2023Aug 20, 2023

• 2023-adhesin-parallel-evolution

  Public
  repository accompanying Smoak, Lindsey et al. 2023 Genetics paper

  HTML

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 15, 2023Mar 15, 2023

• Zn-Cu-SOD-evolution

  Public
  evolution of the Zn/Cu gene family in yeasts

  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 24, 2021Apr 24, 2021

• Summer-2020-Nucleosome-Occupancy

  Public
  WT_No_Pi_Nucleosome_Occupancy

  HTML

  •11 fork•00 stars•00 issues•00 pull requests•Updated Aug 6, 2020Aug 6, 2020

• C016-Pho4-binding-difference

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 4, 2020Jul 4, 2020

• C031-Cg-OSR-regulon

  Public
  Identify the oxidative stress response targets in _C. glabrata_; reproduce results from Roetzer et al 2011 and Kuo et al 2010

  HTML

  •11 fork•00 stars•00 issues•00 pull requests•Updated Dec 13, 2019Dec 13, 2019

• E009-Pi-timecourse

  Public
  Phosphate starvation time course analysis in C. glabrata

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 16, 2019Feb 16, 2019